Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLSGYFLWVKAFHVIAVISWMAALFYLPRLFVYHAENAHKKEFVGVVQIQEKKLYSFIASPAMGFTLITGILMLLIAPEMFKSGGWLHAKLALVVLLLIYHFYCKKCMRELEKDPTGKNARFYRVFNEIPTILMILIVILVVVKPF
4NXL Chain:A ((109-157))
---------WPTAIEVVREIA--AADGSLGHLFGYHLTNAPMIELIG-SQEQEEHLYTQIA---------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4NXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14463 for 243 contacts (-59.5/contact) +
2D Compatibility (PS) -5031 + (NN) -1365 + (LL) 9724
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -14235.0 ( -58.58 by residue)
QMean score : 0.100
(partial model without unconserved sides chains):
PDB file :
Tito_4NXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NXL-query.scw
PDB file :
Tito_Scwrl_4NXL.pdb
: