Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLLVGLGNPTLRYDHTRHNAGFDILDSLVSELDLSFIFSPKHNAYL----CVYKDFILLKPQTYMNLSGESVLSAKNFYK--TKELLIVHDDLDLPLGVVKFKKGGGNGGHNGLKSIDALCSNSYYRLRVGI---SKGINITEHVLSKFHNNEEPLKNAAFEHAKNALKFFIESHDFNATQNRFTLKKPLQIES
4JY7 Chain:A ((4-192))
ISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQGQVPQAM-NQINAYKPA----
General information:
TITO was launched using:
RESULT:
Template:
4JY7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97076 for 1485 contacts (-65.4/contact) +
2D Compatibility (PS) -18725 + (NN) -471 + (LL) 724
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -131898.0 ( -88.82 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_4JY7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JY7-query.scw
PDB file :
Tito_Scwrl_4JY7.pdb
: