Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFTRIPLKVFIKKYNPQEPKKETIENFEKEINSLLENVPRQDDEEFQKNEINKFLKNAYGYDCNTYEKVDSVIYVDKEVRVLIEVKALNNKTEFPKNRENPLSKAFCQMVLYFLEEIEKEKNNSLKHTIICNAHEFFLFDCKDLLSLKEDKRIKKFYKNYAKKEGTDSSKPKFYKDLEQFLQEDFQGELRYTHFNLSDDFKELPLIYQVLSQEVLLKQKRTLDANTLNKDFYEELLYILGLEEQNDKGKILIKPSRTKNSLSGALKEKYKNLDDEEVMALLIAWNNRILFLRLLESLLISFEHFEKERSFLTTGNFKDFNALNTLFFEVLAKKNSERLPEIKENKILGKIPYLNSSLFDKTPLELKGHEIKLLDNKKLEIYKNSVLKKHENYQKDKASLPLLEYFFKFLHLYKFTTTPKDIKDNTDTSESRLINPSVLGLVFEKLNGYKEGSFYTPSFITSYMCKESITTIVLDKFNQKYNIECDKLKELKNYLKNSYKEDKRKEYLQLLLTLRICDPAVGSGHFLVSALNEMVLIAYELGLIASLHRYSLTLENDEIIIHYTPTGEIFNYKKPLRENDPHHHIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFEEGKNTNALETLPNIDINIKCANSLISRFNLNDDLKKIPNIKKKIQEYKDLVAQYKDPNPLYPLNKADLINKIQDLKNTFSLTLKDPKTKAELEKTIEKHIKKYNFFALDDKSLLDGLNYFIPSLFGTLKLSPKEEEEAFASYGRIRALRKKLDDALSGGEYQNAFEWRFEFPEVLDDEGDFLGFDCIIGNPPY-IRQEQ-------IKDLKPLLEKQYQDFYNSTADIYTYFFALSFHLLREKGFSAFITSNKYARAKYGAKLREWLLKKT-TLVSYMELNALKVFESAAVDTSIIHFIKQPPLKESDFKYYEPTPDDKDDLKSTPYLSMKQNALSTESFIFANATLLDLRDKIESVGTPLKDWDIQINYGIKTGANEAFIIPTEKRDEILNACKTQEERERTERLIKPILRGKDIKRYSYEWAGEWLINTHNGYTSNLKSKIPPIDIEKYPATKAHLDAHYDTIATRCDQGDTPYHLRNCAYLEDFEKEKIVYPETSQGAYFIYENSGIFLEKTVFMIVSDAYNLKLLTALLNSKLITFYFKNFCGGCILGKSGYQYNKHALEKIPIPQITEKNQELADKITDCAEQILALKAKDPKANTQKLEKEIDALVYQLYHLTDEEIKTIEDGQ |
2IH4 Chain:A ((99-211)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFST-WKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLG----EVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFKKHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMPKERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLPKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRMLERLPVRREYGFHT------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41726 for 710 contacts (-58.8/contact) +
2D Compatibility (PS) -11224 + (NN) -2679 + (LL) 64244
1D Compatibility (HY) -11600 + (ID) 1700
Total energy: -4685.0 ( -6.60 by residue)
QMean score : 0.309
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