Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAV--NRYITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGVNIETSLLKELADSAENMGGAG-KSSGSGGGDCGIAFS---KTKELAEKLVNEWEKLGIKHLPFHTGRVQITE |
| 4HAC Chain:A ((27-310)) | ------------PGKIYLFGEHAVVY-GETAIACAVELRTRVRAELNDSITIQSQI------------GRTGLDFEKHPYVSAVIEKMRKSIPINGVFLT-----VDSDIPVGSG----LGSSAAVTIASIGALNELFGFGLSLQEIAKLGHEIEIKVQGAASPTDTYVSTFGGVV--------TIPER-------------------RKLKTPDCGIVIGDTGVFSSTKELVANVRQLRESYPDLIEPLMTSIGKISRIGEQLVLSGD----YASIGRLMNVNQGLLDALGVNILE--LSQLIYSARAAGAFGAKITGAGGGGCMVALTAPEKCNQVAEAVAGAGGKVTI-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HAC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85583 for 2439 contacts (-35.1/contact) +
2D Compatibility (PS) -29934 + (NN) -14395 + (LL) 6384
1D Compatibility (HY) -10000 + (ID) 4500
Total energy: -138028.0 ( -56.59 by residue)
QMean score : 0.442
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