Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNEME-KVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLLKK
3EYE Chain:A ((5-151))
----NILLTRIDNRLVHGQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITAETYGFGIRFFTIEKTINVIGK-AAPHQKIFLICRTPQTVRKLVEGGIDLKDVNVGNMHFSEGKKQISSKVYVDDQDLTDLRFIKQRGVNVFIQDVPGD-----------
General information:
TITO was launched using:
RESULT:
Template:
3EYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109199 for 1137 contacts (-96.0/contact) +
2D Compatibility (PS) -15790 + (NN) -6636 + (LL) 892
1D Compatibility (HY) -14400 + (ID) 2650
Total energy: -147783.0 ( -129.98 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3EYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYE-query.scw
PDB file :
Tito_Scwrl_3EYE.pdb
: