Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMANTKTEQDFEKVLKRRDL--IAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGARFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGKVELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG |
1G9D Chain:A ((796-856)) | ----------DFDNTLKKNLLNYIDENKLYLIGSA---EYEKSKVNKYLKTIMPFDLSIYTNDTILIEMFNKYN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7417 for 281 contacts (26.4/contact) +
2D Compatibility (PS) -6208 + (NN) -1980 + (LL) 18728
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 12907.0 ( 45.93 by residue)
QMean score : -0.036
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