Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYLICSDLDGTLL-LKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFAKL-VHPKADVIASNGG-VVAVSGEIIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPPYYFTDEEDKGRVNATKLVAIKSREIFLEHADQFINGIVIEEEDFDKLAVLRSDLEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR |
| 3R4C Chain:A ((18-263)) | --------DVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGR---AASDLHEIDAVPYDGVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTP---TVEQIAGIVEHPVPPVVDIEEMF-ERKECCQLCFYFDEEAEQKVMPL------LSGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79538 for 1992 contacts (-39.9/contact) +
2D Compatibility (PS) -26377 + (NN) -12353 + (LL) 2200
1D Compatibility (HY) -14000 + (ID) 3800
Total energy: -133868.0 ( -67.20 by residue)
QMean score : 0.422
|
|
|