Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVN-RTFTNQQGER---EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
1UE5 Chain:A ((7-106))
----ITIVGNLTADPELRFTPSGAAVANFTVASTPRIYD----EWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEI------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49785 for 568 contacts (-87.6/contact) +
2D Compatibility (PS) -9891 + (NN) -1297 + (LL) -952
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -69525.0 ( -122.40 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_1UE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UE5-query.scw
PDB file :
Tito_Scwrl_1UE5.pdb
: