Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFVKMQEKNENK
3P0W Chain:A ((442-460))
-------------------------MAMQYLVPGWTYDPKRPSL---------
General information:
TITO was launched using:
RESULT:
Template:
3P0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6905 for 65 contacts (-106.2/contact) +
2D Compatibility (PS) -2033 + (NN) -1729 + (LL) 2460
1D Compatibility (HY) -400 + (ID) 250
Total energy: -8857.0 ( -136.26 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_3P0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P0W-query.scw
PDB file :
Tito_Scwrl_3P0W.pdb
: