Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEWEGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF
4J7K Chain:A ((5-90))
--AEIKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGQFIQSKQAMQQYIPILEGISTDLKRIADKFRNTD---------
General information:
TITO was launched using:
RESULT:
Template:
4J7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2390 for 480 contacts (-5.0/contact) +
2D Compatibility (PS) -9245 + (NN) -1037 + (LL) 700
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -17322.0 ( -36.09 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_4J7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J7K-query.scw
PDB file :
Tito_Scwrl_4J7K.pdb
: