Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL
1WM3 Chain:A ((18-86))
------INLKVAGQD--GSVVQFKIKRHTPLSKLMKAYCERQGLS-----MRQIRFRFDGQPINETDTPAQLEMEDEDTIDV-
General information:
TITO was launched using:
RESULT:
Template:
1WM3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42242 for 454 contacts (-93.0/contact) +
2D Compatibility (PS) -7314 + (NN) -3217 + (LL) 788
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -55785.0 ( -122.87 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1WM3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WM3-query.scw
PDB file :
Tito_Scwrl_1WM3.pdb
: