Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNVKIDAAKVAEAKKSAAIVEKSLESTHKKCKSVISYVEGASWSGKSRDAFLTFMELIEKYHADVKKNYKKQKKALTALEDYVEDFENTSYSKDVKRL
2VS0 Chain:A ((3-77))
--MIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEI-AANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLN---------------------
General information:
TITO was launched using:
RESULT:
Template:
2VS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3279 for 402 contacts (8.2/contact) +
2D Compatibility (PS) -8031 + (NN) -5753 + (LL) 1564
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -10941.0 ( -27.22 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2VS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VS0-query.scw
PDB file :
Tito_Scwrl_2VS0.pdb
: