Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTSNINSELADGFQGYTDVRKITVNSTVDVGVSGSLTAVLGQVGSSFGLPGAIGGLGVGLVLDTILSLNGTKDTWKNSINEKMQDLEDWFRVEAK
1WDK Chain:C ((355-383))
---------------------------------ISGTLLNVMKQNGGTFGLSTMCIGLGQGI-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WDK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4547 for 118 contacts (-38.5/contact) +
2D Compatibility (PS) -2837 + (NN) 787 + (LL) 4164
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -5883.0 ( -49.86 by residue)
QMean score : -0.168
(partial model without unconserved sides chains):
PDB file :
Tito_1WDK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WDK-query.scw
PDB file :
Tito_Scwrl_1WDK.pdb
: