Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEVDKSTIGEVEGVTFQSYFLIKNMLHTRVVGDLEKRLPVTLEKMV-EYVESNRKEIIT-PIFIVLNYV---GNVPYVDVYVGIDPYDE
1JYH Chain:A ((94-155))
-------------------------YAVAVARVVG-DDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPK--
General information:
TITO was launched using:
RESULT:
Template:
1JYH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41926 for 307 contacts (-136.6/contact) +
2D Compatibility (PS) -6532 + (NN) -3266 + (LL) 2076
1D Compatibility (HY) -3600 + (ID) 350
Total energy: -53598.0 ( -174.59 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_1JYH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JYH-query.scw
PDB file :
Tito_Scwrl_1JYH.pdb
: