Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGE--LIDFKTPIRYIGSDFQEN-----VWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
1EH6 Chain:A ((59-172)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25207 for 703 contacts (-35.9/contact) +
2D Compatibility (PS) -11810 + (NN) -4666 + (LL) 15648
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -37435.0 ( -53.25 by residue)
QMean score : 0.411
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