Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKTIVDTLIAQRRDRKIKESERRQENYRAKRENLTEVYRSLILIVNLFPNESPTDIIKNIKYGPYYSLENYNGIFRTLDYKIEDYEKRKSFSNLDYEEKNDIDIEISNIEYAKDKLARNRKSYQKAVKCFNQFKDSDKAIFDLYAGTHVQNCLVNFEITINNVFISGMSVGIPDSPYENSIKIASRKLISAMKKDIGIT |
| 1KVD Chain:A ((43-54)) | --------------------------------------------------------------------------------------------------------------------------------------------------------ILQGFEVNWHNG------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1675 for 40 contacts (-41.9/contact) +
2D Compatibility (PS) -1112 + (NN) 1337 + (LL) 12576
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 9726.0 ( 243.15 by residue)
QMean score : -0.483
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