Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLIS-----LNVAVIEKLQEDMGFLFR
1OAS Chain:A ((246-289))
----------------------------------------------------------VVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESF---
General information:
TITO was launched using:
RESULT:
Template:
1OAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3910 for 195 contacts (-20.1/contact) +
2D Compatibility (PS) -4477 + (NN) -3029 + (LL) 5396
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -8770.0 ( -44.97 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1OAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OAS-query.scw
PDB file :
Tito_Scwrl_1OAS.pdb
: