Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEIKRMLQTKEDNSKEQFYPETHVAGIVGLTEYVSGQLPTGVVSVNGKAGRVLLDAEDVHAAKKSHTHEVATYTTDGFMSSFDKQKIDQLVSPEAGVTSINGKTGIVDLFASDLDAAEINHTHAEATTTESGFLSIDDKEKLDAIQVIALETIKEVIE |
2EFV Chain:A ((31-49)) | --------------------------------------------------------------------------------------------------------------------------------------------HKLENVENVDIDTLRRAIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3193 for 62 contacts (-51.5/contact) +
2D Compatibility (PS) -1756 + (NN) 1441 + (LL) 8456
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 3098.0 ( 49.97 by residue)
QMean score : 0.388
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