Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFGMTLLFSRYDAANNTPQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYGDRKYLYVSTTGLSGHFDNSNYAAWALRQVTIM |
4U7N Chain:A ((39-77)) | -----------------------------------------------VSNVSHELRTPLTSLRSYIEALSDG---------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3739 for 93 contacts (40.2/contact) +
2D Compatibility (PS) -2648 + (NN) -585 + (LL) 10624
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 9280.0 ( 99.78 by residue)
QMean score : 0.385
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