Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGS-----PIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFD---EGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKG--TNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHV------------------------PALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQ-----RYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQ---QYLSNQTYFLQISGLKYTFTDTDD-------LDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVT-AIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 4H2B Chain:A ((27-543)) | ----------------------------------------LTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-VYKGAEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANISASGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETP--FLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPS--KEVPAGKYPFIVTSDDG-----------------------RKVPVVQAYAFGKYLGYLKIEFDER-GNVISSHGNPILLDS-SIPEDPSIKADINKWRIKLDDYSTQELG---KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTSCRVPSYD--PLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKM----KVIYPAVEGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H2B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108947 for 3944 contacts (-27.6/contact) +
2D Compatibility (PS) -50185 + (NN) -17422 + (LL) 10820
1D Compatibility (HY) -32400 + (ID) 7150
Total energy: -205284.0 ( -52.05 by residue)
QMean score : 0.435
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