Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLDFSKKTMQDFERDAEVVHATRERSFWRFMLADRRAVFATSVLILITVACIFAFLSPYDPNALSVQDKLMPPNSSHWFGTDDHGRDYLTRVLYGGRVSLLVGVFAMMIAVVVGTLAGTVSGYFGGFIDN-----IVMRFLDIFMSIPSFFLLMILNAYLKP------GISNIIIIIGLLSWMEVARIVRAETLTLKEREFILYSKSSGGGFFHIMFKHIIPNAMPSIVVAASLNVATAILTESALSFLGLGVQQPNASWGSMLNNAQGYVGEATYLALFPGLLILMTILSFNVLGDVLRKGLSRRY |
3TUJ Chain:A ((20-158)) | ---------------------------------------------------------------------------------------------------TFVSGFFGFVIGLPVGVLLYVTRP--GQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPT-GLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLV------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87499 for 849 contacts (-103.1/contact) +
2D Compatibility (PS) -12602 + (NN) 494 + (LL) 12392
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -92615.0 ( -109.09 by residue)
QMean score : 0.141
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