Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISIVQENPNIDMNVLGKGIRKIFIDSFGENLIFKNNEDEIAEKILAL
3OOM Chain:A ((225-259))
-------IVEDYKP-PFYDVVPNDPSFEDMRKVVCVDQQRPNI-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OOM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 947 for 164 contacts (5.8/contact) +
2D Compatibility (PS) -3626 + (NN) -3554 + (LL) 3724
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -6609.0 ( -40.30 by residue)
QMean score : 0.317
(partial model without unconserved sides chains):
PDB file :
Tito_3OOM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OOM-query.scw
PDB file :
Tito_Scwrl_3OOM.pdb
: