Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEQEIIEKVEILPNNFS-ENDSIYISQENIKNLVLFSKENQTVLELLITPFLICVNSGLKYELHYYEISTEISKNDTEIIGFPFGNKLPKEITDNISPKLFVRREDYSAFENFLSQYFNAMKSMGFADDKQAIGMIEHGATLFYEVL
2IID Chain:A ((99-176))
---REYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYI-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7114 for 354 contacts (-20.1/contact) +
2D Compatibility (PS) -7621 + (NN) 2093 + (LL) 4584
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -11058.0 ( -31.24 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_2IID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IID-query.scw
PDB file :
Tito_Scwrl_2IID.pdb
: