Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKNYYTGFEGYPEIDFYTYINGEKTGIEMWEGYFDNIMNEFSPVDGRWVSLAYYYHLYEGWYDESPWVIPDNKKALEQFGTIDIKVLDNVTQEIMMKLIKLLKDNLDSEIFIEYS
1SW1 Chain:A ((203-244))
--------------------------------------------------------------------ILEDDKGALPPYDAIIIVNGNTAKDEKLISVLKLLEDRIDTD------
General information:
TITO was launched using:
RESULT:
Template:
1SW1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51 for 146 contacts (-0.3/contact) +
2D Compatibility (PS) -4503 + (NN) -2969 + (LL) 4296
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -7427.0 ( -50.87 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1SW1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SW1-query.scw
PDB file :
Tito_Scwrl_1SW1.pdb
: