Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMET---WVPSVLKSLDS--KKLTVIDASKGIE---LVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEG--AKQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKLEVLSPIEGITDKEQKKGMD---YIAYMEQNLQALQKTIK |
| 4OXQ Chain:A ((8-285)) | ---------------------------------KLKIVTTNSILYDMTKNITGDKAEIHSIVPVGQDPHEYEIKPKDVQALTDADVIIYNGFNLESGNGWFEKALKQANKSIKDDSVIQASKNVKPIYLKQGEKSE-----------HNIDPHAWLSLGNGIEYVKTIKSALENADKTHAKDYDKQGTEYLSKLEKLNKESKDKFNDIPKEKRVMITSEGAFKYFAQQFDVKPGYIWEINTENQGTPEQMKQAVDFVKENHIKNLLLETSVSDKSMKSLGEETGAKIYGTV----YTDSIGKKGSDGDSYYKMMESNIKTIHESMQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66312 for 2155 contacts (-30.8/contact) +
2D Compatibility (PS) -28693 + (NN) -11496 + (LL) 2576
1D Compatibility (HY) -17200 + (ID) 4800
Total energy: -125925.0 ( -58.43 by residue)
QMean score : 0.541
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