Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTRVMYPAEIKEKAIKMKLAGKSTKEIMRTLNIKNPTQVKTWWRWYRNEETHRFHQGVGKQYKYQKGVPELPEIEQLKIALRQKELELEILKKYKALERK
3C2W Chain:A ((412-454))
-------------------------------LAIRFHRQESGWIFWFRHEEVHRIRWG-GKPEKLLTIGPSGPRL--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3C2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 92 for 129 contacts (0.7/contact) +
2D Compatibility (PS) -4298 + (NN) -2889 + (LL) 6400
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -3495.0 ( -27.09 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_3C2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C2W-query.scw
PDB file :
Tito_Scwrl_3C2W.pdb
: