Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTAEITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNVKVVHGDVLKADVEEVIAEQFAKPELPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVADRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAEVNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDELVEGLNAIGIDLIRRGETLDIPEFAKLSNFLGDFLKEK |
| 3GRV Chain:A ((30-248)) | ---------------------------QCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFN---------KVVANLPYQISSPITFKLIKRGF--DLAVLMYQYEFAKRMVAAAGTKDYGRLSVAVQSRADVEIVAKVPPSAFYPKPKVYSAIVKIKPNKGKY-HIENENFFDDFLRAIFQHRNKSVRKALIDSSKELNYNKDEM------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -151292 for 1696 contacts (-89.2/contact) +
2D Compatibility (PS) -23047 + (NN) -1656 + (LL) 4684
1D Compatibility (HY) -16400 + (ID) 4250
Total energy: -191961.0 ( -113.18 by residue)
QMean score : 0.525
|
|
|