Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTWSVSSAALGRTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNEAGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVGVGVLVNPDDTIEAAGGFMLQLLPGATD-EIIDEIEKNLMALPTVSRMIEAGETPESILAKLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCRNTYDFSEEELKTLYEEAK |
1VQ0 Chain:B ((20-285)) | ----------FDHKVRFSIVRMREVVEEARNRHALSYLATVVLGRALIGAALVTPWLAEKERWTLDIEGNGPIRRVVAQSTSEFTVRGYVANPKVELP-LNEKGKFDVAGAIG-QGVLRVVRDLGLKTPFVSQVPLVSGEIAEDLAYYFAVSEQIPSAFSIGVLVD-SDGVKIAGGFAVQIIDRTLEQEKVEMIEKNIKNLPSISKLFQEAE-PLDVLERIFG--EKVGFVETAEIKYKCDCNREKAKNALLVLDKKELEDMRKEGKG-EVVCKWCNTRYVFS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131661 for 2153 contacts (-61.2/contact) +
2D Compatibility (PS) -28250 + (NN) -4825 + (LL) 2524
1D Compatibility (HY) -26000 + (ID) 5100
Total energy: -193312.0 ( -89.79 by residue)
QMean score : 0.476
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