Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFFYRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFHGVTLGGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATVVGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE
1T3D Chain:A ((100-260))
-------DIQAVRTRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQPVPPHTTAAGVPARIV------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118133 for 1323 contacts (-89.3/contact) +
2D Compatibility (PS) -17272 + (NN) -6993 + (LL) 3708
1D Compatibility (HY) -13600 + (ID) 3500
Total energy: -155790.0 ( -117.76 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1T3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T3D-query.scw
PDB file :
Tito_Scwrl_1T3D.pdb
: