Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIKSISKSELEVMKIIWDFGRAVQYADVAGKLEEKNYSWKKNTVLTFLTRLVEKNLLSVKKVGRKNEYYALVSENEYLERQTETFVEEIYEGDVKGLITNLVQNDLISPDELEDLQQFWKRMKSPNE
1P6R Chain:A ((4-79))
--IPQISDAELEVMKVIWKHS-SINTNEVIKELS-KTSTWSPKTIQTMLLRLIKKGALNHHKEGRVFVYTPNIDESDYIE------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43563 for 520 contacts (-83.8/contact) +
2D Compatibility (PS) -7834 + (NN) 133 + (LL) 3876
1D Compatibility (HY) -5200 + (ID) 1450
Total energy: -54038.0 ( -103.92 by residue)
QMean score : 0.389
(partial model without unconserved sides chains):
PDB file :
Tito_1P6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P6R-query.scw
PDB file :
Tito_Scwrl_1P6R.pdb
: