Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINSNFRSLGSYIMENIYKIPNYQREYSWEETELEDLWMDLSQIINGETESHFFGQIVIHVDKKEKAKLIIDGQQRTSTAVIFLAAMRELFTEMYNAGWDDAQFDAQDITTKFIGRYTQTRDERKLILGENDKSYFSNRIQSVSSEQLGLQKATKSQKRINFAYNYFYKKLEEEINSSDFLEDKYGLLKTFFSTFTEKCSVMFVETDDFNEAFIIFETLNARGKDLETADLLKNHLFKIANKKVGEVKKNWKQMLEFIGTVD--TTKYIRHFWNSQNVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGMKNPAEDNFFETDSQQVLNDLKRLGAKSFYPIILAMVKKDYGPNEIYEVLSAIEVLVVRNFVISGLVANKYETEFSKIAFKIYQEEVESVTEIINLIRTNIIADDVFLNNFSSFKTTNKLRLRYILKKINDSYSKEIAVLNDNNKIHLEHIMPIKADGWDIIKEEHEEYLWKIGNLTLLGSEYNKKSTNKIFNDKKDIYEYSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV |
| 3QDN Chain:A ((229-283)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHQVGRNEEALELLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2074 for 314 contacts (-6.6/contact) +
2D Compatibility (PS) -5663 + (NN) -3314 + (LL) 39448
1D Compatibility (HY) -1200 + (ID) 850
Total energy: 26347.0 ( 83.91 by residue)
QMean score : 0.591
|
|
|