Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLFLTSSFK-DVV---PLFTEFE-SNL-QGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPF---KEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS
1FY2 Chain:A ((1-209))
-MELLLLSNSTLPGKAWLEHALPLIANQLNGRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRV----ADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTIRTTNDMPI----VDPNGFDALDLFPLQINPHFTN---TREQRIR-ELLVVA-PELTVIGLPEGNWIQVSNGQAVLGGPN
General information:
TITO was launched using:
RESULT:
Template:
1FY2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119250 for 1601 contacts (-74.5/contact) +
2D Compatibility (PS) -20828 + (NN) -8734 + (LL) 1144
1D Compatibility (HY) -8400 + (ID) 2350
Total energy: -158418.0 ( -98.95 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_1FY2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FY2-query.scw
PDB file :
Tito_Scwrl_1FY2.pdb
: