Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADT-FGYYSSSEETILLGIITFFSVVAAFFALGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGLQVFTIHGILFLIAGILT-ITKKEYKTNSKEDEGTKWE
3HTR Chain:A ((6-103))
PETNET------LKLIGSDKVQGTAVYGP-DGEKIGSIERVMIEKVSGRVSYAVLSFGGFLGIGDDHYPLPWPALKYNVELG----------------------------------GYQVMVTVDQLERAPKYGPGSEW-
General information:
TITO was launched using:
RESULT:
Template:
3HTR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72907 for 586 contacts (-124.4/contact) +
2D Compatibility (PS) -10061 + (NN) -404 + (LL) 3848
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -81724.0 ( -139.46 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_3HTR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HTR-query.scw
PDB file :
Tito_Scwrl_3HTR.pdb
: