Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILTKELVVFDLEATTKETAIEEMAEMLDERGILADKATYVQAVLEREAHSTTGIGNNIAIPHGKSES---VTKSAIVFARTKEMIEWESLDDEPVNMIFLLAITDSDKTDGHLKILAEIATKLMDDDIVESLKNTRDKEEVIRILNGGVVEI
2FEW Chain:A ((7-146))
------LGAENIFLGRKAATKEEAIRFAGEQLVKGGYV--EPEYVQAMLDREKLTPTYLGESIAVPQGTVEAKDRVLKTGVVFCQYPEGVRFGEEEDDIARLVIGIAARNNE----HIQVITSLTNALDDESVIERLAHTTSVDEVLELLAG-----
General information:
TITO was launched using:
RESULT:
Template:
2FEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92067 for 1075 contacts (-85.6/contact) +
2D Compatibility (PS) -15109 + (NN) -7975 + (LL) 1152
1D Compatibility (HY) -10800 + (ID) 2100
Total energy: -126899.0 ( -118.05 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_2FEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FEW-query.scw
PDB file :
Tito_Scwrl_2FEW.pdb
: