Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQDLQNRLVDQEILHGSDLLDEIHEVKQNNEQLIIELNTKYHTKKEVTKYLSDITGKPVDPSVDVSLPFYSDFGKHITFGKNIFINLNVTFVDLGGITIEDNVLIGPGARLVTVNHLVSPKKRRG--LRVAPICVKKNAWIGANTTILSGVTIGENAIVAADATVTKDVPPNVIVAGSPAKQIRKIIEE
1KRU Chain:A ((16-185))
------------------TDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREI---
General information:
TITO was launched using:
RESULT:
Template:
1KRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98449 for 1277 contacts (-77.1/contact) +
2D Compatibility (PS) -18428 + (NN) -6791 + (LL) 2056
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -135812.0 ( -106.35 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1KRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KRU-query.scw
PDB file :
Tito_Scwrl_1KRU.pdb
: