Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIKNKVIIITGASSGIGKATALLLAEKGAKLVLAARRVEKLEKIVQTIKANSG-EAIFAKTDVTKREDNKKLVELAIERYGKVDAIFLNAGIMPNSPLSALKEDEWEQMIDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWAVRDLMEVLRMESAQEGTNIRTVTIYPAAINTELLETITDKETEQGMTSLYKQYGITPDRIASIVAYAIDQPEDVNVNEFTVGPTSQPW
3TN7 Chain:A ((24-253))
----MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDS-LKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQIEN----PDVRFFELRPGAVDTYFGGSKPGKPKEKGY--------LKPDEIAEAVRCLLKLPKDVRVEELMLRSVYQ--
General information:
TITO was launched using:
RESULT:
Template:
3TN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136175 for 2014 contacts (-67.6/contact) +
2D Compatibility (PS) -25202 + (NN) -12005 + (LL) 1268
1D Compatibility (HY) -15200 + (ID) 4050
Total energy: -191364.0 ( -95.02 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_3TN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TN7-query.scw
PDB file :
Tito_Scwrl_3TN7.pdb
: