Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKEMLNFDYYNPTHIIFGKNRFN---ELNEVIPQDKKVLILYGGGSVERFGTLDKVKAALKSR--EVGEFGGIEANPTYETLIKAIQLVKEENYDFLLAVGGGSVIDGTKFVAAGALFDGEPMDIFG-SGIGEKRPITKAL-PFGTVLTLPATGSEMNSGGVITFVEKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTY---PV---GALLQDRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLGHEITALYGIDHARTLAIVLPSLLNVRRSEKHDKLVQYA----ERVWGITSGSDEEKIDAAILKTREFFESLGAGTRFS-DYGLGEEVVDLLVDQLDRHGLTNISERGDQTLEVSRQIYTNAL |
| 3BFJ Chain:A ((6-353)) | -------FDYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLR--KDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGIAATHEG---DLYQYAGI---ETLTNPLPPIVAVNTTAGTASEVTRHCVLTNTETKVKFVIVSWRNLPSVSINDPLLMIGKPAALTAATGMDALTHAVEAYISKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAYASLLAGM-AFNNANLGYV----------HAMAHQLGGLYDMPHGVANAVLLPHVARYNLIANPEKFADIAELMGENITGLSTLDAAEKAIAAI-------------TRLSMDIGIPQHLRDLGVKETD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BFJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156622 for 2971 contacts (-52.7/contact) +
2D Compatibility (PS) -34784 + (NN) -10254 + (LL) 4176
1D Compatibility (HY) -15600 + (ID) 5000
Total energy: -218084.0 ( -73.40 by residue)
QMean score : 0.422
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