Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVIIDYDTGNTKSISKALDFIGLQNKISSDATEISQADGVILPGVGAYPEAMKELTRRGLNKTLKEIAAGGKPILGVCLGMQLLLESSNEHSFTNGLGLIPGHVEKLPEDPEFAVPHMGWNQLQIKRATPLTKQLDGEYVYYVHSYYANCPEEYIIATSGYSIEV-PGMINKGNIYGAQFHPEKSGQIGLEILKGFKEVTYSCKSSQQ
2WJZ Chain:B ((44-198))
--------------------------------------DLLFIPGV-HFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESE-APGVKGLSLIEGNVVKLRSR---RLPHMGWNEVIFKDTFP------NGYYAFVHTYRAVCEEEHVLGTTEYDGEIFPSAVRKGRILGFQFHPEASSKIGRKLLEKVIECSL-------
General information:
TITO was launched using:
RESULT:
Template:
2WJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93654 for 1209 contacts (-77.5/contact) +
2D Compatibility (PS) -16452 + (NN) -5778 + (LL) 3396
1D Compatibility (HY) -16000 + (ID) 3050
Total energy: -131538.0 ( -108.80 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2WJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WJZ-query.scw
PDB file :
Tito_Scwrl_2WJZ.pdb
: