Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVADFKVKKFVSSTNSGELKVTNLEANTAQMATSSGDLTLSNIKANSSIETDSGKTELTNLTGDLEVNGGSGDVNV-------AGVKAKKLKI-AID-----SGDIELTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
| 3RGX Chain:A ((84-233)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSNSHINGSVSGFKCSASLTSL--DLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISG----ANVVGWVLSDGCGELKHLAISGNKI-----SGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSAL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19479 for 862 contacts (22.6/contact) +
2D Compatibility (PS) -13180 + (NN) 378 + (LL) 12604
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: 10881.0 ( 12.62 by residue)
QMean score : 0.200
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