Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSDDAVAATGVANQILVISIIIYGFISVGVQIIVAQMIGAKKHKEIENVITNGLVVAFLIGIVMSIIFIFMSKNFLTWMGIDPHLVQVGAPFLEIIGGSSVVIAIHASILPILRAHGYVRQSILVPVTISIINVVGNYLFLYGPLAYLDYGVAGVGISTAVANFV-GMGLAIWMLRKYIGYTFHFKKLEQVSKKLLYSILRLGLPSAGENLSYAGSQLVVTAIIAILGTE---ALTTKVYASTVSQFVALFAIALGQASQIIIGRAVGAKEIDKAYKQGLRSWKIGLVVAIVVSVSIYLFAEPIMRLFTTNT------EIIAMTKELFLLSIFLELGRATNIIIISSLNSTGDVRFPFICGLIVMWIVSLPFSYVLGISAGLGLVGVWLAYIIDEGVRAVLMYRRWRSKVWSLKSVI |
| 3VVN Chain:A ((23-453)) | --------------LSIPMMIGMSVQTLYNLADGIWVSGLGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGADNVAVHSLILSLILGVTITITMLPAIDSLFRSMGA--EAVELAIEYARVLLAGAFIIVFNNVGNGILRGEGDANRAMLAMVLGSGLNIVLDPIFIY----TLGFGVVGAAYATLLSMVVTSLFIAYWLFVKRDTYVDITLRDFSPSREILKDILRVGLPSSLSQLSMSIAMFFLNSVAITAGGENGVAVFTSAWRITMLGIVPILGMA--AATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAVVAFIMLFAPQVAYLFT---AQVIKGDLISALRTLPVFLVLTPFGMMTSAM----FQGIGEGEKSLILTIFRTLVMQVGFAYIFVHYTTLGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -402485 for 3674 contacts (-109.5/contact) +
2D Compatibility (PS) -42220 + (NN) -1255 + (LL) 1848
1D Compatibility (HY) -34800 + (ID) 4850
Total energy: -483762.0 ( -131.67 by residue)
QMean score : 0.240
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