Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSITANDLEQDLKKVPHNIL--DVRDADAFVEGHIPDAINIPINELPEKLAT-LDKEKAYTIICY---AGGRSERASQFLAAEGFDVTNVMGGMGAFHGTVTN
3O3W Chain:A ((37-123))
--------DLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAISIPGNKINEDTTKRLSKEKVIITYCWGPACNGATKAAAKF-AQLGFRVKELIGGI---------
General information:
TITO was launched using:
RESULT:
Template:
3O3W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32806 for 564 contacts (-58.2/contact) +
2D Compatibility (PS) -9166 + (NN) -5085 + (LL) 1080
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -54177.0 ( -96.06 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3O3W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O3W-query.scw
PDB file :
Tito_Scwrl_3O3W.pdb
: