Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
3N00 Chain:B ((5-15))
----------------------ITLADHICQII-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3N00.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -818 for 39 contacts (-21.0/contact) +
2D Compatibility (PS) -1000 + (NN) 655 + (LL) 7948
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 4985.0 ( 127.82 by residue)
QMean score : -0.357
(partial model without unconserved sides chains):
PDB file :
Tito_3N00.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N00-query.scw
PDB file :
Tito_Scwrl_3N00.pdb
: