Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSE--SRASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMAPGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAVVTKSFPDNVVVAGNPARVIKTIEVEEK
4ISX Chain:A ((5-187))
--TEKEKMLSGKGYYANDELLVKEREYCKKLTRLFNNTLEDEYEKREDILRQLFGSVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKIE----
General information:
TITO was launched using:
RESULT:
Template:
4ISX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135590 for 1405 contacts (-96.5/contact) +
2D Compatibility (PS) -19984 + (NN) -9762 + (LL) 736
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -189050.0 ( -134.56 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_4ISX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ISX-query.scw
PDB file :
Tito_Scwrl_4ISX.pdb
: