Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFPKKLVASIAVFISLGFIYFRVSTAVAFENTSSASLLPSTGDAFSVWPIVIGVVLVALAVVLFIKKKI
1GL1 Chain:A ((106-134))
---------------------LKLSTAASFSQTVSAVCLPSASDDFA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
1GL1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -895 for 70 contacts (-12.8/contact) +
2D Compatibility (PS) -2710 + (NN) -930 + (LL) 5428
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -1707.0 ( -24.39 by residue)
QMean score : 0.006
(partial model without unconserved sides chains):
PDB file :
Tito_1GL1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GL1-query.scw
PDB file :
Tito_Scwrl_1GL1.pdb
: