Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKNLFKKPKMKDEMLEMKQNQYGARAFNMMIIIVAIVILIKAVVLEASISELWVELLLLIVGGGYYFYSVLKNNVPFMPTISLKQTIRLVFLISAIFGISVGIRNVFFLYADNMSGTELSYQMMMFFFISLFTAIGSGVIFGALAYCLYQLSKWQEKNIMKKIEVENAED |
2KSD Chain:A ((56-86)) | -------------------------------------------------------------------------------------------------------------------------------IRSIFFGLLITPWAVYFLSVVVEQLEESRQR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8640 for 122 contacts (-70.8/contact) +
2D Compatibility (PS) -2901 + (NN) 1101 + (LL) 13664
1D Compatibility (HY) -2400 + (ID) 200
Total energy: 624.0 ( 5.11 by residue)
QMean score : -0.249
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