Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LVIENRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIRDSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYLIWKITGRTEQFDAAFFKMLQTIFALWEVEQHHET-KSPYRFERLDCVPSDTLKRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYAKEIIEAFYPSEIETIKQAATLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHESFHPDYPEDFTREWFSWANMMFCELVLDVAGFRMANVLKN |
3ON6 Chain:A ((43-446)) | ---------------IKQLLTNARLAWMFENCFPNTLDTTVHFDGKDDTFVYTGDIHAMWLRDSGAQVWPYVQLANKDAELKKMLAGVIKRQFKCINIDPYANAFNMNSEGGEWMSDLTDMKPELHERKWEIDSLCYPIRLAYHYWKTTGDASIFSDEWLTAIAKVLKTFKEQQRKEDPKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVN-KKPDLAKECTTLSNEVEAALKKYAVYNHPKYGKIYAFEVDGFGNQLLMDDANVPSLIALPYLGDVKVNDPIYQNTRKFVWSEDNPYFFKGTAGEGIGGPHIGYDMIWPMSIMMKAFTSQNDAEIKTCIKMLMDTDAGTGFMHESFHKNDPKNFTRSWFAWQNTLFGELIL------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ON6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228867 for 3665 contacts (-62.4/contact) +
2D Compatibility (PS) -42780 + (NN) -25314 + (LL) 2276
1D Compatibility (HY) -36400 + (ID) 9200
Total energy: -340285.0 ( -92.85 by residue)
QMean score : 0.503
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