Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVGIIIGTHGEAARELLKSTEMIIGKQDNVEFITFVPG-ENTDTLITKYKEKLDKLDTSEGVIFMVDLFGGSPYNASSQIAL--PEDNMDVVTGVNIPMLLE-TLSMRAASNQKDLVETALTAGSGGVKSLKQSLPKIETEVGEDDL
4TKZ Chain:A ((2-130))
--IKIIIVAHGNFPDGILSSLELIAGHQEYVVGINFIAGMSSNDVRVALQREVID----FKEILVLTDLLGGTPFNVSSALSVEYTDKKIKVLSGLNLSMLMEAVLSRTMFEHVDDLVDKVITSSHEGIVDFSTC-------------
General information:
TITO was launched using:
RESULT:
Template:
4TKZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46736 for 920 contacts (-50.8/contact) +
2D Compatibility (PS) -13649 + (NN) -5893 + (LL) 996
1D Compatibility (HY) -12400 + (ID) 1950
Total energy: -79632.0 ( -86.56 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_4TKZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TKZ-query.scw
PDB file :
Tito_Scwrl_4TKZ.pdb
: