Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVPFVGNVRDGHEFVGQAREMGAVATFWQKNVPNP-PTDFPVILVEDTLLALQELAAKYIQQVKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYTILTMPEDTEVAVLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSGILIYPHEETLLLG--NINGDFRQLTFGKSEA-AEIYPLEIRAEAEGTSF-ITNWEPELEIFVPIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSRLEWITTKSGARILNDAYNSSPTALKTVLKTFMHMDSSGKPKY--LVLADMLELGDLSTKLHQESAEVLENDTIQKVFLYGDAMKAFGEVAESKIGQGKVHHFDTKESLETALLSEIKGNE--WILVKGSYGMGLKDVVENLIIK |
| 1GG4 Chain:A ((21-446)) | ----------------------DITLDAVTTDTRKLTPGCLFVALKGERFDAHDFADQAKAGGAGALL----VSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARVVALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLA--------SLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEM-----PGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQSHAISTA--SGVGE----HFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRAL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1498 for 3350 contacts (0.4/contact) +
2D Compatibility (PS) -41577 + (NN) 81 + (LL) 3256
1D Compatibility (HY) 15200 + (ID) 3450
Total energy: -24992.0 ( -7.46 by residue)
QMean score : 0.238
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