Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIEKISFSLISLAGDSFSKLIEALQAAKESDSELVEQLLKEADDLMIEAHKVQTEMLIQETRGE-QANFSVLLVHAQDTLMNTILASTLIREMIEMHQEIKTLRKEEEK
2LRL Chain:A ((3-103))
-ELEEVVMGLIINSGQARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEAHLVQTK-LIEGDAGEGKMKVSLVLVHAQLHLMTSMLARELITELIELHEKLKA-------
General information:
TITO was launched using:
RESULT:
Template:
2LRL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35192 for 673 contacts (-52.3/contact) +
2D Compatibility (PS) -11345 + (NN) -11168 + (LL) 1132
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -66823.0 ( -99.29 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_2LRL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LRL-query.scw
PDB file :
Tito_Scwrl_2LRL.pdb
: