Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIINENEQLVAETVSRRIIELVKE-KPAS----LICIAGGDTPLLTIEALIKANQAGEVDFSNTQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICFFDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDDVTKRVMSKYFDTDLPLT--HGISLGMQQILAAKEIFLVATGEKKIDIVKQVVEKEPTVAIPATLVKDSNTMLVVDKIAASGVEA
1FQO Chain:A ((1-217))
MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHV-DIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FQO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153825 for 1628 contacts (-94.5/contact) +
2D Compatibility (PS) -22857 + (NN) -11286 + (LL) 2528
1D Compatibility (HY) -14000 + (ID) 2950
Total energy: -202390.0 ( -124.32 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_1FQO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FQO-query.scw
PDB file :
Tito_Scwrl_1FQO.pdb
: